Bioinformatics MCP connectors

Search GBIF species taxonomy, occurrence records, datasets, and publishers.

Look up genes, fetch sequences, predict variant consequences, find orthologs and xrefs via Ensembl.

Hosted DNA/RNA/protein tools: primers, oligos, PCR, cloning, CRISPR, alignment, batch & pipelines.

Canine genomics for agents: breed allele frequencies, AI pathogenicity + OMIA clinical disease layer

RCSB PDB MCP — experimentally determined macromolecular structures.

UniProt MCP — protein sequence + function database.

ChEMBL MCP — drug discovery database (EBI).

AlphaFold DB MCP — predicted protein structures.

Biotech intelligence for AI agents: drugs, targets, diagnostics, PoS estimates, and writeups.

IntAct (EBI) molecular-interaction database MCP. Keyless.

PDBe (Protein Data Bank in Europe, EBI) MCP.

EBI BioStudies MCP.

EBI PRIDE Archive MCP — proteomics (mass-spectrometry) data repository.

Biomedical data: compounds, drug info, and molecular targets

NCI Genomic Data Commons (GDC) MCP.

Query STRING interactions, enrichment, annotations, homology, and PPI networks.

EBI Complex Portal MCP.

Rhea MCP — expert-curated database of biochemical reactions.

NCI CACTUS Chemical Identifier Resolver MCP.

InterPro MCP (EBI) — protein family / domain / functional-site classification.