Uniprot
Server Details
UniProt MCP — protein sequence + function database.
- Status
- Healthy
- Last Tested
- Transport
- Streamable HTTP
- URL
- Repository
- pipeworx-io/mcp-uniprot
- GitHub Stars
- 0
- Server Listing
- mcp-uniprot
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Tool Definition Quality
Average 4.5/5 across 36 of 36 tools scored. Lowest: 3.9/5.
Many tools overlap in purpose, such as multiple question-answering tools (ask_pipeworx, ask_pipeworx_grounded, deep_research) and multiple company profiling tools (entity_profile, compare_entities, recent_changes). The set mixes UniProt, Pipeworx, Polymarket, and general utilities, making it hard for an agent to choose the correct tool.
Tool names follow no consistent pattern: they mix verb_noun (ask_pipeworx, validate_claim), noun-only (get, search), compound (polymarket_arbitrage, scan_dependency), and vague terms (process, run, execute-like). The lack of a predictable naming convention hinders quick identification of tool function.
With 36 tools, the server is overloaded for its primary purpose (UniProt). Only about 5-6 tools are directly related to protein data; the rest are unrelated (Pipeworx, Polymarket, memory utilities). This dilutes focus and suggests poor scoping.
For a UniProt-focused server, basic operations (fetch, search, feature lookup) exist, but advanced features like cross-reference exploration, BLAST, or batch processing are missing. The inclusion of many non-UniProt tools makes the set feel incomplete for its stated domain.
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{
"$schema": "https://glama.ai/mcp/schemas/connector.json",
"maintainers": [{ "email": "your-email@example.com" }]
}The email address must match the email associated with your Glama account. Once published, Glama will automatically detect and verify the file within a few minutes.
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The connector status is unhealthy when Glama is unable to successfully connect to the server. This can happen for several reasons:
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